Logstash skipped half of log file

Ah yes, found it.
https://www.elastic.co/guide/en/beats/filebeat/current/filebeat-input-log.html#filebeat-input-log-clean-options

There's even an FAQ!
https://www.elastic.co/guide/en/beats/filebeat/current/faq.html#inode-reuse-issue

Thanks for your help!