I have indexed accesslogs using logstash into kibana5.0 .It does not show up in discover,graph,visualize anywhere ...but in x-pack with monitoring i find it when i select show system indices as:
Go to Management, select Index Patterns and click Add New.
You will want to provide the index pattern which the logs were indexed to. You can a list of indexes by using the cat API of Elasticsearch. For example: http://localhost:9200/_cat/indices
Logstash defaults to creating index patterns beginning with logstash-, so your index pattern would be logstash-*
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